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Agilent 6490 Triple Quad LC/MS

Listing #:LS-005735
Brand:Agilent
Model:6490
Availability:In Stock
Condition:Refurbished
Warranty:90 Days
Onsite Installation:Available upon request
$79,400.00
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Need extended mass range for peptide work? The Agilent 6495B extends the mass range to m/z 3,000 for large peptide fragment detection. For a lower-cost entry point, the Agilent 6430 and Agilent 6460 cover standard quantitative workflows.

Description

Quick Answer

The Agilent 6490 Triple Quad LC/MS is a high-sensitivity LC-MS/MS system with iFunnel-enhanced ion transmission, an m/z 5–1,400 mass range, and Agilent Jet Stream source for demanding multi-residue MRM methods. This refurbished unit is fully tested by Alliant Scientific and ships with a 90-day warranty.

Listing last updated: August 2026

Agilent 6490 Triple Quad LC/MS Overview

This system pairs iFunnel ion optics with the Agilent Jet Stream source to deliver strong sensitivity and reproducibility across demanding sample matrices, from biological fluids to environmental extracts, without the extended mass range (or price) of the 6495B.

At the core of the 6490 is an advanced ion handling design that enhances ion capture and transmission efficiency, enabling detection of compounds at extremely low concentration levels. This increased sensitivity allows analysts to confidently measure trace compounds that are difficult to detect with conventional LC-MS/MS systems.

Agilent 6490 Triple Quad LC/MS system is specifically optimized for quantitative workflows using multiple reaction monitoring (MRM). Its high-speed acquisition capabilities enable accurate monitoring of a large number of transitions within a single run, making it effective for multi-residue and high-throughput analyses. It maintains strong reproducibility and signal stability even when processing demanding matrices such as biological fluids, environmental extracts, or food products, and is fully compatible with fast UHPLC methods — capturing narrow peak widths while maintaining sufficient data density for precise quantitation. Rapid polarity switching allows simultaneous analysis of compounds requiring both positive and negative ionization without extending run time.

An optimized collision cell design improves fragmentation efficiency while reducing background interference, producing cleaner spectra and more reliable identification of target analytes. Combined with electrospray ionization (ESI) and optional multi-mode sources, the platform adapts to a wide range of analytical applications.

Agilent 6490 Triple Quad LC/MS is offered fully refurbished and tested, in working condition by Alliant Scientific.

Includes:

  • Agilent 6490 Triple Quad LC/MS
    • Jet Stream Source
    • Two (2) Vacuum Pumps
  • Data System
  • 90-Day Warranty

Optional:

  • Agilent UHPLC Front End Systems (1260 or 1290 Infinity Series)
  • Premium Refurbishment with Extended Warranty

Disclaimer: All brand names and trademarks are the property of their respective owners and are used for identification only. We are not an authorized dealer. Software, if included, is not transferable or upgradable.

Technical Specifications

General
Instrument Type Liquid Chromatography–Tandem Mass Spectrometry (LC‑MS/MS)
Model Agilent 6490 (G6490A)
Mass Analyzer Triple Quadrupole (QQQ)
Ionization Source Electrospray Ionization (ESI), optional multi-mode sources
Application Range Ultra-trace quantitative analysis in complex sample matrices
Mass Spectrometer Performance
Mass Range m/z 5 – 1400
Scan Speed Up to ~12,500 Da/sec
Sensitivity Sub-picogram detection capability (compound dependent)
Polarity Switching ~20 ms
Minimum Dwell Time 1 ms
Resolution ~0.4 Da
Mass Accuracy ~0.01% or 0.1 Da
MRM / Quantitative Performance
Acquisition Modes MRM, Dynamic MRM, SIM, Full Scan, Product Ion Scan
MRM Speed Up to ~500 transitions per second
Total MRM Capacity >40,000 transitions per method
Quantitation Capability Ultra-trace multi-analyte analysis with high selectivity
Dynamic Range Up to ~10⁶
Collision Cell
Type High-pressure hexapole collision cell with linear acceleration
Function Efficient ion fragmentation for MS/MS analysis
Noise Reduction Optimized design for low background signal
Ion Optics & Sensitivity
Ion Transmission Enhanced ion focusing system for improved signal intensity
Desolvation Technology Thermally assisted ion focusing (Jet Stream design)
Sensitivity Level Ultra-trace detection capability for demanding applications
LC Compatibility
Supported Systems Agilent 1200 / 1260 / 1290 HPLC & UHPLC series
UHPLC Compatibility Optimized for fast separations and narrow peak widths
Peak Handling High data density for accurate quantitation
Software & Control
Software Agilent MassHunter Workstation
Functionality Method development, data acquisition, quantitation, reporting
Automation Integrated instrument control and sequence processing
Physical
System Configuration Modular LC-MS/MS system
Footprint Compact benchtop mass spectrometer
Maintenance Access Front-access service design
Build Robust architecture for continuous laboratory operation

Additional information

Availability

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Condition

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Onsite Installation

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Key Features

  • Ultra-Sensitive Detection Performance
    Engineered for laboratories that require extremely low detection limits, making it ideal for trace and ultra-trace analysis.
  • Advanced Ion Transmission Design
    Uses enhanced ion focusing and transfer efficiency to significantly improve signal strength and overall sensitivity.
  • Wide Dynamic Range
    Accurately quantifies both very low and high concentration compounds within the same analytical run.
  • High-Speed Acquisition for UHPLC
    Captures narrow chromatographic peaks with precision, supporting fast LC separations without data loss.
  • Large-Scale MRM Capability
    Handles extensive multi-analyte methods, allowing thousands of transitions in a single workflow.
  • Rapid Polarity Switching
    Easily alternates between ion modes to improve method efficiency and reduce total run time.
  • Low Noise Collision Cell Design
    Minimizes chemical background interference for improved signal clarity and reproducibility.
  • Versatile Ion Source Options
    Compatible with ESI and multi-mode ionization configurations for broader application flexibility.
  • Integrated Software Workflow
    Controlled through Agilent MassHunter software for streamlined setup, data acquisition, and reporting.
  • Reliable High-Throughput Operation
    Built for demanding lab environments requiring consistent performance over extended use.

Applications

  • Pharmaceutical Analysis
    Quantitative drug analysis, metabolite profiling, and regulatory testing workflows.
  • Environmental Monitoring
    Detection of trace contaminants and pollutants in water, soil, and air samples.
  • Food Safety Testing
    Screening for pesticide residues, toxins, and chemical contaminants across large sample sets.
  • Clinical & Biomarker Research
    Accurate quantitation of biological markers in complex biological matrices.
  • Forensic & Toxicology Labs
    Identification and quantification of drugs, toxins, and unknown compounds.
  • Omics Research (Proteomics & Metabolomics)
    Targeted studies of peptides, metabolites, and small molecules in advanced research labs.

Start Guide – Agilent 6490 Triple Quad LC/MS.

agilent-6400-series-triple-quad-quick-start-guide

FAQ (Frequently Asked Questions)

What is the Agilent 6490 best used for?

It’s designed for highly sensitive quantitative analysis, especially for applications that require detecting very low concentrations in complex samples.

How is the 6490 different from the 6495B?

The 6490 covers an m/z 5–1,400 range, suited for standard small-molecule quantitation. The 6495B extends the mass range to m/z 3,000, making it better suited for large peptide fragment work in addition to small-molecule analysis.

How is the 6490 different from lower models like the 6430?

The 6490 offers significantly higher sensitivity and a wider dynamic range, making it better suited for ultra-trace applications and demanding workflows.

Can the 6490 handle high-throughput testing?

Yes, it supports fast scan speeds and large MRM methods, making it well suited for laboratories running many samples daily.

Is the 6490 compatible with UHPLC systems?

Yes, it’s fully compatible with modern UHPLC setups and performs well with fast, narrow chromatographic peaks.

What ion sources are supported?

The system supports electrospray ionization (ESI) via the Agilent Jet Stream source, and can be configured with additional ionization options depending on application needs.

Does this unit include a warranty?

Yes — this unit ships with a 90-day warranty.